GSoC/GCI Archive
Google Summer of Code 2010 Open Bioinformatics Foundation

BioJava Packages for Identification, Classification, and Visualization of Posttranslational Modification of Proteins

by jianjiong for Open Bioinformatics Foundation

In this project, three BioJava packages will be developed in order to identify PTMs in 3D protein structures, to generate sequence diagrams with PTM annotations, and to generate 2D tree images of carbohydrate (glycan) structures, respectively. These packages will allow for better annotations of PTMs on 3D structures and hence facilitate structural studies of PTMs.