GSoC/GCI Archive
Google Summer of Code 2014 National Resource for Network Biology (NRNB)

Implementing TieDIE algorithm as a CYTOSCAPE App ( IDEA- 43 )

by Srikanth Bezawada for National Resource for Network Biology (NRNB)

TieDIE is an algorithm that finds "subnetworks" connecting genomic perturbations to transcriptional changes in large gene interaction networks. This algorithm is useful in optimizing cancer treatment by viewing cancer from a gene network perspective thus enhancing our understanding of disease initiation, progression and therapy. This project deploys TieDIE algorithm into cytoscape as an app.